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64 lines
1.9 KiB
R
64 lines
1.9 KiB
R
edsWrapper <-
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function(data.exp, run, override = FALSE,
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kerpk = 1, fitmaxiter = 50, gam = 0.6, scl.factor = 0.1, maxwdth=0.20) {
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print("... Started edsWrapper")
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# check if edspk has already completed successfully for the current job
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current.dirname <- getwd()
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print(current.dirname)
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current.filename <- "eds-peak-data.rda"
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edsdatafile <- paste(current.dirname, current.filename, sep = "/")
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if (file.exists(edsdatafile) && !override) {
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print("... Started if-clause 1")
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# File already exists
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# return the data using load() or data()
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load(file = edsdatafile)
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if (run > length(edsres)) {
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print("... Started if-clause 1:1")
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# then it does not really exist
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edsres[[run]] <- edspk(data.exp,
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kerpk = kerpk,
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fitmaxiter = fitmaxiter,
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gam = gam,
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scl.factor = scl.factor,
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maxwdth = maxwdth)
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save(edsres, file = edsdatafile)
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print("... Ended if-clause 1:1")
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}
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print("... Ended if-clause 1")
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return(edsres)
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} else {
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print("... Started else-clause 1")
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if (!exists("edsres")) {
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edsres <- list()
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print("... edsres list created")
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}
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# Need to call edspk() and save its results to file as above
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edsres[[run]] <- edspk(data.exp,
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kerpk = kerpk,
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fitmaxiter = fitmaxiter,
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gam = gam,
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scl.factor = scl.factor,
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maxwdth = maxwdth)
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save(edsres, file = edsdatafile)
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print("... Ended else-clause 1")
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return(edsres)
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}
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}
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